If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 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'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ), 'gf_id' => 'HOM05D000535', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000535' ), 'data_identifier' => 'HOM05D000535', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000535', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1019', 'num_species' => '87' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p18600' => 'bna', 'A02p18610' => 'bna', 'A02p18640' => 'bna', 'A02p18650' => 'bna', 'A02p18660' => 'bna', 'A02p18680' => 'bna', 'A06p13920' => 'bna', 'A07p29870' => 'bna', 'A07p39210' => 'bna', 'A07p39220' => 'bna', 'A07p39230' => 'bna', 'A07p39240' => 'bna', 'A07p39270' => 'bna', 'A07p39300' => 'bna', 'A08p30680' => 'bna', 'A09p17870' => 'bna', 'Aa31LG4G14740' => 'aar', 'Aa31LG4G2650' => 'aar', 'Aa31LG4G3540' => 'aar', 'Aa31LG4G3550' => 'aar', 'Aa31LG4G3560' => 'aar', 'Aa31LG4G3570' => 'aar', 'Aa31LG4G3590' => 'aar', 'Aa31LG4G3600' => 'aar', 'Aa31LG7G2680' => 'aar', 'Aa31LG9G5740' => 'aar', 'Aa31LG9G5770' => 'aar', 'Aa31LG9G5790' => 'aar', 'Actinidia26771' => 'ach', 'Actinidia34684' => 'ach', 'Ah.02g129700' => 'amhyb', 'Ah.03g132920' => 'amhyb', 'Ah.03g132930' => 'amhyb', 'Ah.03g135100' => 'amhyb', 'Ah.03g135110' => 'amhyb', 'Ah.03g135120' => 'amhyb', 'Ah.04g150130' => 'amhyb', 'Ah.04g155680' => 'amhyb', 'Ah.08g209350' => 'amhyb', 'AL1G30220' => 'aly', 'AL2G33060' => 'aly', 'AL2G33090' => 'aly', 'AL2G33100' => 'aly', 'Aqoxy1G02937' => 'aox', 'Aqoxy3G04312' => 'aox', 'Aqoxy6G01729' => 'aox', 'Aqoxy6G01730' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02W0P7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.11G63Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1J64TJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1T55P5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.20IV4T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2J79JM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4H9MWH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4K4Y7I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6S81H9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.71B2RZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.80UKGG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.91JQUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.95ACYI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9N9F55' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ARQH3Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D2FN5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FKL9A5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K2SWWG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M82AL9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N5JP9Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q36S6K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGL1S4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RK6UR7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RXWH3W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZR4T8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SJW6UC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TZ4EFW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U2UX9Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UFW4RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V48W00' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XL5037' => 'arhy', 'AT1G17860' => 'ath', 'AT1G73260' => 'ath', 'AT1G73325' => 'ath', 'AT1G73330' => 'ath', 'ATR0618G106' => 'atr', 'ATR0618G349' => 'atr', 'Atru.chr10.1136' => 'acertr', 'Atru.chr10.1140' => 'acertr', 'Atru.chr10.1153' => 'acertr', 'Atru.chr10.1154' => 'acertr', 'Atru.chr10.1155' => 'acertr', 'Atru.chr6.1195' => 'acertr', 'Atru.chr6.1198' => 'acertr', 'Atru.chr6.1204' => 'acertr', 'Atru.chr9.67' => 'acertr', 'AUR62005428' => 'cqu', 'AUR62005776' => 'cqu', 'AUR62005777' => 'cqu', 'AUR62005780' => 'cqu', 'AUR62005781' => 'cqu', 'AUR62005782' => 'cqu', 'AUR62005785' => 'cqu', 'AUR62014089' => 'cqu', 'AUR62024286' => 'cqu', 'AUR62028776' => 'cqu', 'AUR62028777' => 'cqu', 'AUR62028778' => 'cqu', 'AUR62028780' => 'cqu', 'AUR62028781' => 'cqu', 'AUR62028783' => 'cqu', 'AUR62028784' => 'cqu', 'AUR62039970' => 'cqu', 'AUR62039971' => 'cqu', 'AUR62040281' => 'cqu', 'AUR62044107' => 'cqu', 'AUR62044109' => 'cqu', 'AUR62044110' => 'cqu', 'AUR62044112' => 'cqu', 'AUR62044113' => 'cqu', 'AUR62044115' => 'cqu', 'AUR62044166' => 'cqu', 'AUR62044168' => 'cqu', 'AUR62044169' => 'cqu', 'AUR62044172' => 'cqu', 'AUR62044481' => 'cqu', 'AUR62044483' => 'cqu', 'AUR62044484' => 'cqu', 'BcaB03g12616' => 'bca', 'BcaB03g13527' => 'bca', 'BcaB03g13529' => 'bca', 'BcaB03g13531' => 'bca', 'BcaB03g15038' => 'bca', 'BcaB03g15039' => 'bca', 'BcaB03g15040' => 'bca', 'BcaB03g15041' => 'bca', 'BcaB03g15042' => 'bca', 'BcaB03g15043' => 'bca', 'BcaB03g15044' => 'bca', 'BcaB03g15045' => 'bca', 'BcaB03g15046' => 'bca', 'BcaB03g15050' => 'bca', 'BcaB03g15701' => 'bca', 'BcaB03g15702' => 'bca', 'BcaB03g15703' => 'bca', 'BcaB03g15704' => 'bca', 'BcaB04g17496' => 'bca', 'BcaB07g33694' => 'bca', 'BcaB07g34010' => 'bca', 'BcaC04g22195' => 'bca', 'BcaC07g38881' => 'bca', 'BcaC07g39060' => 'bca', 'BcaC08g45653' => 'bca', 'BcaC08g45654' => 'bca', 'BcaC08g45655' => 'bca', 'BcaC08g45656' => 'bca', 'BcaC08g46744' => 'bca', 'BcaC08g46745' => 'bca', 'BcaC08g46747' => 'bca', 'BcaC08g46748' => 'bca', 'BcaC08g46749' => 'bca', 'BcaC08g46750' => 'bca', 'BcaC08g46752' => 'bca', 'BcaC08g46753' => 'bca', 'BcaC08g46756' => 'bca', 'BolC2t09133H' => 'bol', 'BolC2t09134H' => 'bol', 'BolC2t09139H' => 'bol', 'BolC2t09141H' => 'bol', 'BolC2t09142H' => 'bol', 'BolC2t09143H' => 'bol', 'BolC2t09147H' => 'bol', 'BolC2t09148H' => 'bol', 'BolC2t09149H' => 'bol', 'BolC5t30326H' => 'bol', 'BolC6t38525H' => 'bol', 'BolC6t39779H' => 'bol', 'BolC6t39780H' => 'bol', 'BolC6t39781H' => 'bol', 'BolC6t39783H' => 'bol', 'BolC6t39785H' => 'bol', 'BolC6t39786H' => 'bol', 'BolC6t39788H' => 'bol', 'BolC6t39791H' => 'bol', 'BolC8t49458H' => 'bol', 'BolC8t49674H' => 'bol', 'BolC9t55136H' => 'bol', 'BraA02t06895Z' => 'bra', 'BraA02t06900Z' => 'bra', 'BraA02t06901Z' => 'bra', 'BraA02t06907Z' => 'bra', 'BraA02t06908Z' => 'bra', 'BraA02t06909Z' => 'bra', 'BraA02t06910Z' => 'bra', 'BraA06t24533Z' => 'bra', 'BraA07t30625Z' => 'bra', 'BraA07t31470Z' => 'bra', 'BraA07t31471Z' => 'bra', 'BraA07t31472Z' => 'bra', 'BraA07t31473Z' => 'bra', 'BraA07t31474Z' => 'bra', 'BraA07t31479Z' => 'bra', 'BraA08t32904Z' => 'bra', 'BraA08t32905Z' => 'bra', 'BraA08t34998Z' => 'bra', 'BraA09t37420Z' => 'bra', 'C02p30760' => 'bna', 'C02p30780' => 'bna', 'C02p30820' => 'bna', 'C02p30890' => 'bna', 'C02p30930' => 'bna', 'C02p30950' => 'bna', 'C02p30960' => 'bna', 'C02p30970' => 'bna', 'C02p31000' => 'bna', 'C05p16240' => 'bna', 'C06p34110' => 'bna', 'C06p34120' => 'bna', 'C06p47400' => 'bna', 'C06p47420' => 'bna', 'C06p47430' => 'bna', 'C06p47450' => 'bna', 'C06p47480' => 'bna', 'C06p47490' => 'bna', 'C06p47530' => 'bna', 'C08p18230' => 'bna', 'C08p20460' => 'bna', 'C08p20480' => 'bna', 'C09p22220' => 'bna', 'CAN.G1156.34' => 'can', 'CAN.G128.72' => 'can', 'CAN.G1433.10' => 'can', 'CAN.G1631.6' => 'can', 'CAN.G1876.2' => 'can', 'CAN.G1954.2' => 'can', 'CAN.G65.68' => 'can', 'CAN.G65.69' => 'can', 'CAN.G65.70' => 'can', 'CAN.G65.71' => 'can', 'CAN.G65.72' => 'can', 'CAN.G74.22' => 'can', 'CAN.G765.29' => 'can', 'CAN.G765.30' => 'can', 'CAN.G765.32' => 'can', 'CAN.G765.33' => 'can', 'CAN.G765.34' => 'can', 'CAN.G861.36' => 'can', 'CAN.G861.38' => 'can', 'CAN.G861.39' => 'can', 'CAN.G861.40' => 'can', 'CAN.G929.11' => 'can', 'CAN.G929.13' => 'can', 'CAN.G929.14' => 'can', 'CAN.G929.15' => 'can', 'CAN.G929.4' => 'can', 'CAN.G929.5' => 'can', 'CAN.G929.6' => 'can', 'CAN.G929.7' => 'can', 'CAN.G929.8' => 'can', 'CAN.G929.9' => 'can', 'CANSAT56G0194' => 'cansat', 'CANSAT56G4212' => 'cansat', 'CANSAT56G4213' => 'cansat', 'CARHR018480' => 'chi', 'CARHR066270' => 'chi', 'CARHR066280' => 'chi', 'CARHR066380' => 'chi', 'CARHR262740' => 'chi', 'Carub.0001s1759' => 'cru', 'Carub.0002s2005' => 'cru', 'Carub.0004s1488' => 'cru', 'Ca_03923_v3' => 'car', 'Ca_09173_v3' => 'car', 'Ca_09174_v3' => 'car', 'Ca_15754_v3' => 'car', 'Ca_24100_v3' => 'car', 'Ca_25239_v3' => 'car', 'Ca_25361_v3' => 'car', 'Ca_25362_v3' => 'car', 'Ca_25363_v3' => 'car', 'Ca_26713_v3' => 'car', 'Ca_26714_v3' => 'car', 'Ca_26715_v3' => 'car', 'Ca_26737_v3' => 'car', 'Ca_28260_v3' => 'car', 'Cc00_g04330' => 'ccan', 'Cc00_g19300' => 'ccan', 'Cc00_g21930' => 'ccan', 'Cc00_g23760' => 'ccan', 'Cc00_g28690' => 'ccan', 'Cc00_g28720' => 'ccan', 'Cc00_g28730' => 'ccan', 'Cc00_g30520' => 'ccan', 'Cc00_g31050' => 'ccan', 'Cc00_g34040' => 'ccan', 'Cc02_g29530' => 'ccan', 'Cc04_g08330' => 'ccan', 'Cc04_g08350' => 'ccan', 'Cc04_g08360' => 'ccan', 'Cc04_g08380' => 'ccan', 'Cc04_g08390' => 'ccan', 'Cc04_g08400' => 'ccan', 'Cc04_g08410' => 'ccan', 'Cc10_g11700' => 'ccan', 'Cc10_g11720' => 'ccan', 'Cfa017803' => 'cfa', 'Cfa019505' => 'cfa', 'Cfa019506' => 'cfa', 'Ciclev10002395m.g' => 'ccl', 'Ciclev10016767m.g' => 'ccl', 'Ciclev10021858m.g' => 'ccl', 'Ciclev10022001m.g' => 'ccl', 'Ciclev10022041m.g' => 'ccl', 'Ciclev10022124m.g' => 'ccl', 'Ciclev10022129m.g' => 'ccl', 'Ciclev10022156m.g' => 'ccl', 'Ciclev10022211m.g' => 'ccl', 'Ciclev10022276m.g' => 'ccl', 'Ciclev10022282m.g' => 'ccl', 'Ciclev10022284m.g' => 'ccl', 'Ciclev10022911m.g' => 'ccl', 'Ciclev10023253m.g' => 'ccl', 'Ciclev10023257m.g' => 'ccl', 'Ciclev10023287m.g' => 'ccl', 'Ciclev10023320m.g' => 'ccl', 'Ciclev10023371m.g' => 'ccl', 'Ciclev10023442m.g' => 'ccl', 'Ciclev10023465m.g' => 'ccl', 'Ciclev10023557m.g' => 'ccl', 'Ciclev10023565m.g' => 'ccl', 'Ciclev10023572m.g' => 'ccl', 'Ciclev10023581m.g' => 'ccl', 'Ciclev10023590m.g' => 'ccl', 'Ciclev10023623m.g' => 'ccl', 'Ciclev10023743m.g' => 'ccl', 'Ciclev10023748m.g' => 'ccl', 'Ciclev10024002m.g' => 'ccl', 'Ciclev10024096m.g' => 'ccl', 'Ciclev10024528m.g' => 'ccl', 'Ciclev10024584m.g' => 'ccl', 'Ciclev10027262m.g' => 'ccl', 'CiPaw.11G154900' => 'cil', 'CiPaw.11G155000' => 'cil', 'CiPaw.11G155100' => 'cil', 'CiPaw.11G155200' => 'cil', 'CiPaw.16G074800' => 'cil', 'CiPaw.16G075200' => 'cil', 'ClCG01G014760' => 'cla', 'ClCG02G015990' => 'cla', 'ClCG02G016000' => 'cla', 'ClCG02G016010' => 'cla', 'COL.COLO4_04629' => 'col', 'COL.COLO4_08721' => 'col', 'COL.COLO4_08723' => 'col', 'COL.COLO4_16143' => 'col', 'COL.COLO4_16148' => 'col', 'COL.COLO4_16151' => 'col', 'COL.COLO4_16157' => 'col', 'COL.COLO4_17375' => 'col', 'COL.COLO4_17376' => 'col', 'COL.COLO4_29947' => 'col', 'Cpa.g.sc2.361' => 'cpa', 'Cpa.g.sc3.355' => 'cpa', 'Cpa.g.sc3.356' => 'cpa', 'Cpa.g.sc58.133' => 'cpa', 'Cpa.g.sc8.313' => 'cpa', 'Cpa.g.sc8.317' => 'cpa', 'CsaV3_1G007570' => 'csa', 'CsaV3_2G005010' => 'csa', 'CsaV3_2G005020' => 'csa', 'CSS0003160' => 'camsi', 'CSS0015346' => 'camsi', 'CSS0016167' => 'camsi', 'CSS0021540' => 'camsi', 'CSS0030185' => 'camsi', 'CSS0038674' => 'camsi', 'CSS0038986' => 'camsi', 'CSS0047130' => 'camsi', 'DCAR_011409' => 'dca', 'DCAR_011411' => 'dca', 'DCAR_011412' => 'dca', 'DCAR_011413' => 'dca', 'DCAR_011414' => 'dca', 'DCAR_011415' => 'dca', 'DCAR_011416' => 'dca', 'DCAR_011417' => 'dca', 'DCAR_011421' => 'dca', 'DCAR_011685' => 'dca', 'DCAR_011686' => 'dca', 'DCAR_021971' => 'dca', 'DCAR_021972' => 'dca', 'DCAR_023555' => 'dca', 'DCAR_026808' => 'dca', 'Dinv04608' => 'din', 'Dinv04609' => 'din', 'Dinv05239' => 'din', 'Dinv08278' => 'din', 'Dinv10701' => 'din', 'Dinv10702' => 'din', 'Dinv10703' => 'din', 'Dinv10704' => 'din', 'Dinv10705' => 'din', 'Dinv10707' => 'din', 'Dinv10708' => 'din', 'Dinv10709' => 'din', 'Dinv10710' => 'din', 'Dinv10711' => 'din', 'Dinv10713' => 'din', 'Dinv10714' => 'din', 'Dinv12307' => 'din', 'Dinv12309' => 'din', 'Dinv36150' => 'din', 'Duzib052G1135' => 'dzi', 'Duzib128G0529' => 'dzi', 'Duzib128G1043' => 'dzi', 'Duzib205G0258' => 'dzi', 'Duzib205G1520' => 'dzi', 'Duzib248G1428' => 'dzi', 'Duzib268G0452' => 'dzi', 'Duzib268G0791' => 'dzi', 'Duzib268G0985' => 'dzi', 'Duzib268G0986' => 'dzi', 'Duzib268G1310' => 'dzi', 'Duzib268G1738' => 'dzi', 'Duzib268G1756' => 'dzi', 'ECA233G0242' => 'eca', 'ECA233G4337' => 'eca', 'ECA234G1726' => 'eca', 'ECA238G1316' => 'eca', 'ECA238G1670' => 'eca', 'ECA238G3099' => 'eca', 'ECA238G4515' => 'eca', 'ECA238G4632' => 'eca', 'ECA246G5188' => 'eca', 'EL10Ac3g06172' => 'bvu', 'EL10Ac3g07353' => 'bvu', 'EL10Ac3g07357' => 'bvu', 'EL10Ac6g13186' => 'bvu', 'EL10Ac6g13187' => 'bvu', 'EL10Ac6g13198' => 'bvu', 'EL10Ac6g13199' => 'bvu', 'EL10Ac6g13202' => 'bvu', 'EL10Ac8g18861' => 'bvu', 'EL10Ac8g19489' => 'bvu', 'EL10Ac9g20937' => 'bvu', 'Eucgr.K02323' => 'egr', 'Eucgr.K02326' => 'egr', 'Eucgr.L01961' => 'egr', 'Eucgr.L03158' => 'egr', 'FAN08G0118' => 'fan', 'FAN11G0650' => 'fan', 'FAN11G2490' => 'fan', 'FAN13G1742' => 'fan', 'FAN13G2343' => 'fan', 'FAN16G2271' => 'fan', 'FAN16G2894' => 'fan', 'FAN21G0416' => 'fan', 'FAN25G1043' => 'fan', 'FAN25G2042' => 'fan', 'FAN25G2191' => 'fan', 'FAN25G3174' => 'fan', 'FvH4_3g17480' => 'fve', 'FvH4_3g17790' => 'fve', 'FvH4_5g18500' => 'fve', 'FvH4_5g18510' => 'fve', 'Glyma.01G095000' => 'gma', 'Glyma.01G096200' => 'gma', 'Glyma.03G068200' => 'gma', 'Glyma.08G235300' => 'gma', 'Glyma.08G235400' => 'gma', 'Glyma.08G341000' => 'gma', 'Glyma.08G341100' => 'gma', 'Glyma.08G341300' => 'gma', 'Glyma.08G341400' => 'gma', 'Glyma.08G341700' => 'gma', 'Glyma.08G342000' => 'gma', 'Glyma.08G342051' => 'gma', 'Glyma.08G342200' => 'gma', 'Glyma.08G342300' => 'gma', 'Glyma.09G155500' => 'gma', 'Glyma.09G162500' => 'gma', 'Glyma.09G162600' => 'gma', 'Glyma.09G162700' => 'gma', 'Glyma.09G162800' => 'gma', 'Glyma.09G163000' => 'gma', 'Glyma.09G163100' => 'gma', 'Glyma.09G163200' => 'gma', 'Glyma.09G163300' => 'gma', 'Glyma.09G163600' => 'gma', 'Glyma.09G163700' => 'gma', 'Glyma.09G163800' => 'gma', 'Glyma.09G163900' => 'gma', 'Glyma.12G234700' => 'gma', 'Glyma.12G234800' => 'gma', 'Glyma.15G211500' => 'gma', 'Glyma.16G206100' => 'gma', 'Glyma.16G206300' => 'gma', 'Glyma.16G211700' => 'gma', 'Glyma.16G211800' => 'gma', 'Glyma.16G212100' => 'gma', 'Glyma.16G212200' => 'gma', 'Glyma.16G212400' => 'gma', 'Glyma.16G212500' => 'gma', 'Gohir.A05G392000' => 'ghi', 'Gohir.A05G392100' => 'ghi', 'Gohir.A09G051800' => 'ghi', 'Gohir.A10G214900' => 'ghi', 'Gohir.A10G215000' => 'ghi', 'Gohir.A10G215016' => 'ghi', 'Gohir.A10G215032' => 'ghi', 'Gohir.A10G215048' => 'ghi', 'Gohir.A10G215064' => 'ghi', 'Gohir.D04G025000' => 'ghi', 'Gohir.D04G025100' => 'ghi', 'Gohir.D09G052700' => 'ghi', 'Gohir.D10G223500' => 'ghi', 'Gohir.D10G223600' => 'ghi', 'Gohir.D10G223650' => 'ghi', 'Gohir.D10G223700' => 'ghi', 'Gohir.D10G223751' => 'ghi', 'Gohir.D10G223800' => 'ghi', 'Gohir.D10G223900' => 'ghi', 'Gohir.D10G224000' => 'ghi', 'Gorai.011G254400' => 'gra', 'Gorai.011G254500' => 'gra', 'Gorai.011G254600' => 'gra', 'Gorai.011G254700' => 'gra', 'Gorai.011G254800' => 'gra', 'Gorai.011G254900' => 'gra', 'Gorai.012G027600' => 'gra', 'Gorai.012G027700' => 'gra', 'GSVIVG01012920001' => 'vvi', 'GSVIVG01012922001' => 'vvi', 'GSVIVG01012926001' => 'vvi', 'GSVIVG01012931001' => 'vvi', 'GSVIVG01012933001' => 'vvi', 'GSVIVG01012936001' => 'vvi', 'HanXRQChr05g0158931' => 'han', 'HanXRQChr05g0158941' => 'han', 'HanXRQChr05g0161351' => 'han', 'HanXRQChr05g0161361' => 'han', 'HanXRQChr06g0164731' => 'han', 'HanXRQChr06g0164741' => 'han', 'HanXRQChr06g0164761' => 'han', 'HanXRQChr06g0164771' => 'han', 'HanXRQChr06g0164781' => 'han', 'HanXRQChr06g0164791' => 'han', 'HanXRQChr06g0164801' => 'han', 'HanXRQChr06g0165011' => 'han', 'HanXRQChr06g0165021' => 'han', 'HanXRQChr06g0165031' => 'han', 'HanXRQChr06g0165041' => 'han', 'HanXRQChr06g0165061' => 'han', 'HanXRQChr08g0211621' => 'han', 'HanXRQChr08g0211631' => 'han', 'HanXRQChr08g0211641' => 'han', 'HanXRQChr08g0211651' => 'han', 'HanXRQChr08g0211661' => 'han', 'HanXRQChr08g0211891' => 'han', 'HanXRQChr08g0211901' => 'han', 'HanXRQChr14g0444671' => 'han', 'HanXRQChr14g0444681' => 'han', 'HanXRQChr16g0506311' => 'han', 'HanXRQChr16g0506331' => 'han', 'HanXRQChr16g0506341' => 'han', 'HanXRQChr16g0527271' => 'han', 'HanXRQChr17g0538161' => 'han', 'HanXRQChr17g0550511' => 'han', 'HanXRQChr17g0550521' => 'han', 'Haze_08448' => 'cav', 'Haze_08460' => 'cav', 'Haze_08461' => 'cav', 'Haze_18412' => 'cav', 'Hma1.2p1_0060F.1_g032810' => 'hma', 'Hma1.2p1_0135F.1_g061615' => 'hma', 'Hma1.2p1_0135F.1_g061660' => 'hma', 'Hma1.2p1_0253F.1_g103190' => 'hma', 'Hma1.2p1_0460F.1_g157635' => 'hma', 'Hma1.2p1_0807F.1_g221380' => 'hma', 'Hma1.2p1_0807F.1_g221390' => 'hma', 'Hma1.2p1_0807F.1_g221410' => 'hma', 'Hma1.2p1_0807F.1_g221420' => 'hma', 'Hma1.2p1_0816F.1_g222920' => 'hma', 'Hma1.2p1_0989F.1_g244860' => 'hma', 'Hma1.2p1_0989F.1_g244870' => 'hma', 'Hma1.2p1_1624F.1_g294263' => 'hma', 'Hma1.2p1_1624F.1_g294266' => 'hma', 'Hma1.2p1_1624F.1_g294280' => 'hma', 'Hma1.2p1_1656F.1_g296030' => 'hma', 'Hma1.2p1_1656F.1_g296035' => 'hma', 'Lalb_Chr01g0008701' => 'lal', 'Lalb_Chr03g0031361' => 'lal', 'Lalb_Chr03g0033251' => 'lal', 'Lalb_Chr03g0033261' => 'lal', 'Lalb_Chr14g0370171' => 'lal', 'Lalb_Chr14g0370191' => 'lal', 'Lalb_Chr19g0133691' => 'lal', 'Lalb_Chr22g0354021' => 'lal', 'Lalb_Chr24g0398611' => 'lal', 'Lj2g0000790' => 'lja', 'Lj2g0002029' => 'lja', 'Lj2g0002605' => 'lja', 'Lj2g0003621' => 'lja', 'Lj2g0004816' => 'lja', 'Lj2g0005225' => 'lja', 'Lj2g0006666' => 'lja', 'Lj2g0009599' => 'lja', 'Lj2g0010766' => 'lja', 'Lj2g0011821' => 'lja', 'Lj2g0012634' => 'lja', 'Lj2g0018017' => 'lja', 'Lj2g0020121' => 'lja', 'Lj2g0022912' => 'lja', 'Lj2g0026918' => 'lja', 'Lj2g0027096' => 'lja', 'Lj2g0028248' => 'lja', 'Lj2P607T10' => 'lonja', 'Lj3g0004853' => 'lja', 'Lj5g0017298' => 'lja', 'Lj5P167T32' => 'lonja', 'Lj6P734T41' => 'lonja', 'Lj9C411T7' => 'lonja', 'Lj9P411T41' => 'lonja', 'LjContig00385g0001066' => 'lja', 'LjContig00385g0003813' => 'lja', 'LjContig00385g0008709' => 'lja', 'Lju110A3T17' => 'lonja', 'Lju170C15T10' => 'lonja', 'Lju170C16T0' => 'lonja', 'Lju170C17T0' => 'lonja', 'Lju170C17T2' => 'lonja', 'Lju170C18T0' => 'lonja', 'Lju170C19T0' => 'lonja', 'Lju170C19T1' => 'lonja', 'Lju170C20T6' => 'lonja', 'Lju432C5T4' => 'lonja', 'Lju50C49T6' => 'lonja', 'Lju50C49T7' => 'lonja', 'Lsat_1_v5_gn_2_111441' => 'lsa', 'Lsat_1_v5_gn_2_112040' => 'lsa', 'Lsat_1_v5_gn_2_112080' => 'lsa', 'Lsat_1_v5_gn_2_112120' => 'lsa', 'Lsat_1_v5_gn_2_112140' => 'lsa', 'Lsat_1_v5_gn_3_3380' => 'lsa', 'Lsat_1_v5_gn_4_23340' => 'lsa', 'Lsat_1_v5_gn_8_18560' => 'lsa', 'Manes.01G126000' => 'mes', 'Manes.01G126100' => 'mes', 'Manes.01G126300' => 'mes', 'Manes.01G126400' => 'mes', 'Manes.02G083500' => 'mes', 'MBI03_g13455_MAGBIO' => 'mbi', 'MBI03_g13456_MAGBIO' => 'mbi', 'MBI03_g13457_MAGBIO' => 'mbi', 'MBI06_g27485_MAGBIO' => 'mbi', 'MBI06_g27486_MAGBIO' => 'mbi', 'MBI18_g32029_MAGBIO' => 'mbi', 'MD03G1251400' => 'mdo', 'MD11G1269300' => 'mdo', 'MD11G1269400' => 'mdo', 'Medtr0084s0030' => 'mtr', 'Medtr0100s0150' => 'mtr', 'Medtr0211s0080' => 'mtr', 'Medtr0302s0030' => 'mtr', 'Medtr1g035770' => 'mtr', 'Medtr1g057110' => 'mtr', 'Medtr2g072980' => 'mtr', 'Medtr2g073010' => 'mtr', 'Medtr3g014820' => 'mtr', 'Medtr3g014870' => 'mtr', 'Medtr3g106585' => 'mtr', 'Medtr3g106620' => 'mtr', 'Medtr3g463590' => 'mtr', 'Medtr6g009563' => 'mtr', 'Medtr6g009650' => 'mtr', 'Medtr6g017225' => 'mtr', 'Medtr6g044780' => 'mtr', 'Medtr6g044810' => 'mtr', 'Medtr6g045097' => 'mtr', 'Medtr6g045403' => 'mtr', 'Medtr6g045433' => 'mtr', 'Medtr6g059410' => 'mtr', 'Medtr6g059530' => 'mtr', 'Medtr6g059650' => 'mtr', 'Medtr6g059680' => 'mtr', 'Medtr6g059730' => 'mtr', 'Medtr6g059760' => 'mtr', 'Medtr6g059780' => 'mtr', 'Medtr6g059810' => 'mtr', 'Medtr6g065460' => 'mtr', 'Medtr6g065570' => 'mtr', 'Medtr6g066190' => 'mtr', 'Medtr6g066210' => 'mtr', 'Medtr6g078040' => 'mtr', 'Medtr6g078070' => 'mtr', 'Medtr6g078100' => 'mtr', 'Medtr6g078120' => 'mtr', 'Medtr6g078140' => 'mtr', 'Medtr6g078250' => 'mtr', 'Medtr6g078260' => 'mtr', 'Medtr6g078280' => 'mtr', 'Medtr6g078290' => 'mtr', 'Medtr7g037410' => 'mtr', 'Medtr7g108815' => 'mtr', 'Medtr8g059790' => 'mtr', 'Medtr8g060550' => 'mtr', 'Medtr8g461050' => 'mtr', 'Medtr8g461690' => 'mtr', 'MELO3C000887.2' => 'cme', 'MELO3C002175.2' => 'cme', 'MELO3C002176.2' => 'cme', 'MELO3C002177.2' => 'cme', 'MELO3C004296.2' => 'cme', 'Migut.O00272' => 'egut', 'MSTRG.10952' => 'ama', 'MSTRG.10954' => 'ama', 'MSTRG.11520' => 'ama', 'MSTRG.11530' => 'ama', 'MSTRG.11531' => 'ama', 'MSTRG.11534' => 'ama', 'MSTRG.11561' => 'ama', 'Nitab4.5_0000023g0480' => 'nta', 'Nitab4.5_0000339g0140' => 'nta', 'Nitab4.5_0000339g0150' => 'nta', 'Nitab4.5_0000425g0210' => 'nta', 'Nitab4.5_0000425g0230' => 'nta', 'Nitab4.5_0000477g0200' => 'nta', 'Nitab4.5_0000477g0210' => 'nta', 'Nitab4.5_0000782g0030' => 'nta', 'Nitab4.5_0000782g0070' => 'nta', 'Nitab4.5_0001486g0010' => 'nta', 'Nitab4.5_0001495g0070' => 'nta', 'Nitab4.5_0001495g0130' => 'nta', 'Nitab4.5_0002771g0010' => 'nta', 'Nitab4.5_0003040g0010' => 'nta', 'Nitab4.5_0003040g0020' => 'nta', 'Nitab4.5_0003040g0030' => 'nta', 'Nitab4.5_0003040g0040' => 'nta', 'Nitab4.5_0003884g0060' => 'nta', 'Nitab4.5_0004363g0010' => 'nta', 'Nitab4.5_0004423g0010' => 'nta', 'Nitab4.5_0006903g0030' => 'nta', 'Nitab4.5_0007090g0020' => 'nta', 'Nitab4.5_0007717g0030' => 'nta', 'Nitab4.5_0010672g0010' => 'nta', 'Nitab4.5_0012105g0010' => 'nta', 'Nitab4.5_0016396g0010' => 'nta', 'Nn1g09445' => 'nnu', 'Nn1g09446' => 'nnu', 'Nn2g10820' => 'nnu', 'Nn2g13123' => 'nnu', 'Nn3g18116' => 'nnu', 'Nn3g18117' => 'nnu', 'Nn3g18118' => 'nnu', 'Nn3g18120' => 'nnu', 'Nn3g18573' => 'nnu', 'Nn3g18575' => 'nnu', 'Nn3g18577' => 'nnu', 'Nn3g18980' => 'nnu', 'Nn4g23054' => 'nnu', 'Nn4g23055' => 'nnu', 'Nn4g25149' => 'nnu', 'Nn4g25150' => 'nnu', 'Nn5g27969' => 'nnu', 'Nn5g28809' => 'nnu', 'Nn5g28810' => 'nnu', 'Nn6g34814' => 'nnu', 'Oeu018758.1' => 'oeu', 'Oeu020484.1' => 'oeu', 'Oeu020485.1' => 'oeu', 'Oeu020486.1' => 'oeu', 'Oeu029073.1' => 'oeu', 'Oeu029075.1' => 'oeu', 'Oeu032705.1' => 'oeu', 'Oeu032757.1' => 'oeu', 'Oeu043974.1' => 'oeu', 'Oeu057516.1' => 'oeu', 'Os04g0526600' => 'osa', 'Peaxi162Scf00171g00131' => 'pax', 'Peaxi162Scf00358g00004' => 'pax', 'Peaxi162Scf00643g00055' => 'pax', 'Peaxi162Scf00643g00538' => 'pax', 'PGR044G0702' => 'pgr', 'PGR142G1324' => 'pgr', 'PGSC0003DMG400008536' => 'stu', 'PGSC0003DMG400008546' => 'stu', 'PGSC0003DMG400010131' => 'stu', 'PGSC0003DMG400010132' => 'stu', 'PGSC0003DMG400010136' => 'stu', 'PGSC0003DMG400010141' => 'stu', 'PGSC0003DMG400010144' => 'stu', 'PGSC0003DMG400010149' => 'stu', 'PGSC0003DMG400010170' => 'stu', 'PGSC0003DMG400013701' => 'stu', 'PGSC0003DMG400015219' => 'stu', 'PGSC0003DMG400015286' => 'stu', 'PGSC0003DMG400026966' => 'stu', 'PGSC0003DMG400026967' => 'stu', 'PGSC0003DMG400027052' => 'stu', 'PGSC0003DMG400027053' => 'stu', 'PGSC0003DMG400027054' => 'stu', 'PGSC0003DMG400029534' => 'stu', 'PGSC0003DMG400046234' => 'stu', 'Phvul.004G129500' => 'pvu', 'Phvul.004G129600' => 'pvu', 'Phvul.004G129700' => 'pvu', 'Phvul.004G129800' => 'pvu', 'Phvul.004G129900' => 'pvu', 'Phvul.004G130000' => 'pvu', 'Phvul.004G130400' => 'pvu', 'Phvul.004G130500' => 'pvu', 'Phvul.004G137600' => 'pvu', 'Phvul.004G138000' => 'pvu', 'Phvul.004G138300' => 'pvu', 'Phvul.004G138500' => 'pvu', 'Phvul.011G166500' => 'pvu', 'Phvul.011G169800' => 'pvu', 'Phvul.011G169900' => 'pvu', 'Potri.001G309900' => 'ptr', 'Potri.004G000400' => 'ptr', 'Potri.004G067600' => 'ptr', 'Potri.004G067800' => 'ptr', 'Potri.004G067900' => 'ptr', 'Potri.007G111500' => 'ptr', 'Potri.007G111600' => 'ptr', 'Potri.007G111700' => 'ptr', 'Potri.007G111800' => 'ptr', 'Potri.017G153200' => 'ptr', 'Potri.017G153400' => 'ptr', 'Potri.017G153466' => 'ptr', 'Potri.017G153600' => 'ptr', 'Potri.019G006900' => 'ptr', 'Potri.019G088200' => 'ptr', 'Prupe.4G155200' => 'ppe', 'Prupe.5G074400' => 'ppe', 'Prupe.5G074500' => 'ppe', 'Psat0s2953g0040' => 'psa', 'Psat0s2953g0080' => 'psa', 'Psat0s2953g0120' => 'psa', 'Psat0s2953g0160' => 'psa', 'Psat0s4676g0040' => 'psa', 'Psat1g007640' => 'psa', 'Psat1g008000' => 'psa', 'Psat1g031760' => 'psa', 'Psat1g031840' => 'psa', 'Psat1g112520' => 'psa', 'Psat1g112600' => 'psa', 'Psat1g116360' => 'psa', 'Psat1g122080' => 'psa', 'Psat1g122280' => 'psa', 'Psat1g122400' => 'psa', 'Psat1g122440' => 'psa', 'Psat1g122520' => 'psa', 'Psat4g138880' => 'psa', 'Psat4g138920' => 'psa', 'Psat4g160080' => 'psa', 'Psat5g029880' => 'psa', 'Psat5g029920' => 'psa', 'PSO017G0167' => 'pso', 'PSO017G1606' => 'pso', 'PSO017G6542' => 'pso', 'PSO063G4340' => 'pso', 'PSO170G2432' => 'pso', 'PSO170G4576' => 'pso', 'PSO541G3925' => 'pso', 'PSO675G1598' => 'pso', 'PSO782G5179' => 'pso', 'QL09p011629' => 'qlo', 'QL09p011635' => 'qlo', 'QL09p011643' => 'qlo', 'QL09p011646' => 'qlo', 'QL09p011651' => 'qlo', 'QL10p033926' => 'qlo', 'RcHm_v2.0_Chr5g0029031' => 'rch', 'RcHm_v2.0_Chr5g0029081' => 'rch', 'RcHm_v2.0_Chr7g0177011' => 'rch', 'Rhsim08G0010100' => 'rsi', 'Rhsim08G0010200' => 'rsi', 'Sabra04G0045300' => 'sbr', 'Sabra04G0045500' => 'sbr', 'Sabra04G0045600' => 'sbr', 'Sabra04G0045700' => 'sbr', 'Sabra04G0045800' => 'sbr', 'Sabra07G0091500' => 'sbr', 'Sabra07G0091600' => 'sbr', 'Sabra16G0195700' => 'sbr', 'Sabra17G0125900' => 'sbr', 'Sabra17G0126000' => 'sbr', 'Sabra19G0017900' => 'sbr', 'Sabra19G0018000' => 'sbr', 'Sabra19G0024100' => 'sbr', 'Sabra19G0024200' => 'sbr', 'Sabra19G0098500' => 'sbr', 'SalBow3G2587' => 'sbo', 'SalBow5G1184' => 'sbo', 'SalBow5G3210' => 'sbo', 'SalBow5G3406' => 'sbo', 'Sc14g0008160' => 'sci', 'Sc14g0008170' => 'sci', 'Sc14g0008180' => 'sci', 'Sc14g0008190' => 'sci', 'Sc14g0008200' => 'sci', 'Sc14g0008220' => 'sci', 'Sc14g0008240' => 'sci', 'Sc14g0008250' => 'sci', 'Sed0013324' => 'sed', 'Sed0020580' => 'sed', 'Sed0022029' => 'sed', 'Sed0025983' => 'sed', 'SEGI_05164' => 'sgi', 'SEGI_22196' => 'sgi', 'SEGI_27373' => 'sgi', 'SEGI_31337' => 'sgi', 'SEGI_32163' => 'sgi', 'SGA_v2.0_scaffold14G07091' => 'sas', 'SGA_v2.0_scaffold14G07094' => 'sas', 'SGA_v2.0_scaffold14G07097' => 'sas', 'SGA_v2.0_scaffold238G43890' => 'sas', 'SGA_v2.0_scaffold238G43892' => 'sas', 'SGA_v2.0_scaffold238G43897' => 'sas', 'SGA_v2.0_scaffold25G10739' => 'sas', 'Solyc03g020010.1' => 'sly', 'Solyc03g098670.1' => 'sly', 'Solyc03g098710.1' => 'sly', 'Solyc03g098730.1' => 'sly', 'Solyc03g098740.1' => 'sly', 'Solyc04g150105.1' => 'sly', 'Solyc06g072210.1' => 'sly', 'Solyc06g072220.1' => 'sly', 'Solyc06g072230.1' => 'sly', 'Solyc11g022590.1' => 'sly', 'Sopen03g029380' => 'spe', 'Sopen03g029420' => 'spe', 'Sopen03g029440' => 'spe', 'Sopen03g029450' => 'spe', 'Sopen03g029620' => 'spe', 'Sopen06g028530' => 'spe', 'Sopen06g028540' => 'spe', 'Sopen06g028550' => 'spe', 'Sp1g15940' => 'spa', 'Sp5g28230' => 'spa', 'Sp5g28240' => 'spa', 'Sp5g28260' => 'spa', 'TAR371G0040' => 'tar', 'TAR371G0845' => 'tar', 'TAR374G0418' => 'tar', 'TAR374G0927' => 'tar', 'TAR629G0176' => 'tar', 'TAR629G0853' => 'tar', 'THA.LOC104811423' => 'tha', 'THA.LOC104812190' => 'tha', 'THA.LOC104812195' => 'tha', 'THA.LOC104813238' => 'tha', 'THA.LOC104813293' => 'tha', 'THA.LOC104813935' => 'tha', 'THA.LOC104814040' => 'tha', 'THA.LOC104814041' => 'tha', 'Thecc.02G055500' => 'tca', 'Thecc.02G055600' => 'tca', 'Thecc.02G055700' => 'tca', 'Thecc.03G051300' => 'tca', 'Thecc.03G051600' => 'tca', 'Thecc.03G051800' => 'tca', 'Thecc.03G051900' => 'tca', 'Thecc.05G197900' => 'tca', 'Thecc.05G198000' => 'tca', 'Thhalv10008818m.g' => 'esa', 'Thhalv10019129m.g' => 'esa', 'Thhalv10019151m.g' => 'esa', 'TPR.G10840' => 'tpr', 'TPR.G15456' => 'tpr', 'TPR.G16475' => 'tpr', 'TPR.G16491' => 'tpr', 'TPR.G17980' => 'tpr', 'TPR.G27452' => 'tpr', 'TPR.G27454' => 'tpr', 'TPR.G27457' => 'tpr', 'TPR.G27460' => 'tpr', 'TPR.G28351' => 'tpr', 'TPR.G3057' => 'tpr', 'TPR.G3152' => 'tpr', 'TPR.G3156' => 'tpr', 'TPR.G3159' => 'tpr', 'TPR.G34999' => 'tpr', 'TPR.G35003' => 'tpr', 'TPR.G3702' => 'tpr', 'TPR.G37100' => 'tpr', 'TPR.G3724' => 'tpr', 'TPR.G3727' => 'tpr', 'TPR.G3980' => 'tpr', 'TPR.G5811' => 'tpr', 'TPR.G5828' => 'tpr', 'TPR.G5846' => 'tpr', 'TPR.G6046' => 'tpr', 'TPR.G6065' => 'tpr', 'TPR.G6098' => 'tpr', 'TPR.G8844' => 'tpr', 'TPR.G8847' => 'tpr', 'TWI12G0051' => 'twi', 'TWI15G0556' => 'twi', 'TWI15G1241' => 'twi', 'TWI32G0636' => 'twi', 'TWI32G1004' => 'twi', 'vmacro18604' => 'vma', 'vmacro18605' => 'vma', 'VMungo0464G0329' => 'vmu', 'VMungo0464G0487' => 'vmu', 'VMungo0464G0809' => 'vmu', 'VMungo0464G1147' => 'vmu', 'VMungo0464G1244' => 'vmu', 'VMungo0464G1346' => 'vmu', 'VMungo0464G1379' => 'vmu', 'VMungo0464G1443' => 'vmu', 'VMungo0464G1451' => 'vmu', 'VMungo0464G1579' => 'vmu', 'VMungo0464G1632' => 'vmu', 'VMungo0464G1832' => 'vmu', 'VMungo0464G1866' => 'vmu', 'VMungo0464G1990' => 'vmu', 'VMungo0464G2067' => 'vmu', 'VMungo1127G0967' => 'vmu', 'Zm00001eb076760' => 'zma' ) $gf_id = 'HOM05D000535' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000535' ) $data_identifier = 'HOM05D000535' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 39, 'aar' => (int) 12, 'ach' => (int) 2, 'amhyb' => (int) 9, 'aly' => (int) 4, 'aox' => (int) 4, 'arhy' => (int) 31, 'ath' => (int) 4, 'atr' => (int) 2, 'acertr' => (int) 9, 'cqu' => (int) 32, 'bca' => (int) 37, 'bol' => (int) 22, 'bra' => (int) 19, 'can' => (int) 31, 'cansat' => (int) 3, 'chi' => (int) 5, 'cru' => (int) 3, 'car' => (int) 14, 'ccan' => (int) 20, 'cfa' => (int) 3, 'ccl' => (int) 33, 'cil' => (int) 6, 'cla' => (int) 4, 'col' => (int) 10, 'cpa' => (int) 6, 'csa' => (int) 3, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 19, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 11, 'egr' => (int) 4, 'fan' => (int) 12, 'fve' => (int) 4, 'gma' => (int) 38, 'ghi' => (int) 20, 'gra' => (int) 8, 'vvi' => (int) 6, 'han' => (int) 32, 'cav' => (int) 4, 'hma' => (int) 17, 'lal' => (int) 9, 'lja' => (int) 22, 'lonja' => (int) 17, 'lsa' => (int) 8, 'mes' => (int) 5, 'mbi' => (int) 6, 'mdo' => (int) 3, 'mtr' => (int) 48, 'cme' => (int) 5, 'egut' => (int) 1, 'ama' => (int) 7, 'nta' => (int) 26, 'nnu' => (int) 20, 'oeu' => (int) 10, 'osa' => (int) 1, 'pax' => (int) 4, 'pgr' => (int) 2, 'stu' => (int) 19, 'pvu' => (int) 15, 'ptr' => (int) 15, 'ppe' => (int) 3, 'psa' => (int) 22, 'pso' => (int) 9, 'qlo' => (int) 6, 'rch' => (int) 3, 'rsi' => (int) 2, 'sbr' => (int) 15, 'sbo' => (int) 4, 'sci' => (int) 8, 'sed' => (int) 4, 'sgi' => (int) 5, 'sas' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 8, 'spa' => (int) 4, 'tar' => (int) 6, 'tha' => (int) 8, 'tca' => (int) 9, 'esa' => (int) 3, 'tpr' => (int) 29, 'twi' => (int) 5, 'vma' => (int) 2, 'vmu' => (int) 16, 'zma' => (int) 1 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb076760' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1